MRI Convert Opera To Hyperstack¶
The tool converts images taken with the Opera into hyperstacks. The image names are in the form
where r is the row, c the column, f the field, p the z-position and ch the channel. The tool converts all images in the input folder. You can find an example image here: image.zip. Download and unzip it and run the tool on the image folder.
To install the tool, download the files Convert_Opera_To_Hyperstack.ijm and convert_Opera_To_Hyperstack.py, save them into the folder macros/toolsets of your FIJI installation and
Select the "Convert Opera to Hyperstack" toolset from the >> button of the ImageJ launcher.