Documents
Volker Baecker
Cell Image Analyzer
04/05/2011 04:10 PM
A description of the first version of the MRI Cell Image Analyzer that has been published as
Volker Bäcker and Pierre Travo. Cell Image Analyzer - A visual scripting interface for ImageJ and its usage at the microscopy facility Montpellier RIO Imaging In: ImageJ User & Developer Conference - Conference Proceedings. Luxembourg: Centre de Recherche Public Henri Tudor; 2006 p. 105-110.
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Automatic analysis of microscopy images
04/05/2011 05:14 PM
A talk about MRI-CIA held by Volker Bäcker, the first time the 13.12.2005 at the CRBM, Montpellier.
Cell Image Analyzer - ImageJ conference slides
04/05/2011 05:49 PM
Slides of the presentation held in 2006 at the ImageJ User and Developer Conference in Luxembourg by Volker Bäcker
Automatic measurement of plant features
04/05/2011 11:09 PM
Presentation about mri-cia held at the "WORKSHOP ON GROWTH PHENOTYPING AND IMAGING IN PLANTS" in Montpellier, in 2007
mri grid tool
04/06/2011 01:17 PM
The MRI Grid is a tool in MRI Cell Image Analyzer, that can be used to associate measurements with labelled positions on a board.
MRI Object Modeling Workbench - User Manual
04/06/2011 01:22 PM
The OMW allows to extract objects from large datasets. It has been created for the purpose of 3d-modelling but other usages are possible, for example object tracing in time series.
3d modeling with the MRI Object Modeling Workbench
04/06/2011 01:25 PM
How to do 3d-modeling with the omw in 7 steps
MRI CIA Operations Manual
04/06/2011 03:36 PM
A description of the operations available in the CIA. The documents is created from the online help.
MRI CIA Toolbox Manual
04/06/2011 03:45 PM
The user-manual of the mri toolbox
Split-And-Merge-Segmentation
04/11/2011 10:14 AM
Dimitri Vibert: Développement d'un plugin de segmentation d'image cellulaire pour le logiciel libre ImageJ
mri-cia-apps-measure_root_length_and_diameter
04/15/2011 05:28 PM
The application measures the total length and the average thickness of filament like structures.
frap-tool - analysis and design
06/22/2011 05:44 PM
The frap tool allows to export the intensity measurements of the brightest cube in a selected region in a series of 3d images from a FRAP experiment.
As an extension multiple selections for the region of interest should be possible within one experiment....