OMERO users meeting 2016

Literature
06/16/2016

Main topics

  • Big data (what is exactly the strow problem?)
  • Where are the limits
  • New file formats (tiff is obsolete) HDF5?
  • More access to data on filesystem
  • Core facility challenges
  • D
  • DataFlow
  • Data integration / Federation

Towards a web-based client

  • Web import (Andrea) and better ROI management
  • Many advantage: Single sign on (integration with other systems), deployment, horizontal scaling through read-only servers

Infrastructure

  • Examples of production tuning.
  • Linking to cluster for image analysis
  • Archiving

Image Processing via OMERO

Public Repository:

  • Publishing Data: Galleries, Lab's website, examples. Everything is exposed to public user. Functionality exposed can be controlled by url filters
  • Resources: examples IDR, JCB, digital pathology, teaching,...

Customization:

  • web apps (like omero.figure on top, middle, left of right panel)
  • Loggin screen!!
  • Loggin redirection

Files